PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0013s0193.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 233aa    MW: 25637.8 Da    PI: 10.1564
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0013s0193.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.85.1e-331468155
              G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         kprlrWtp+LH++Fv+av++LGG+ekAtPk++++lm++kgLtl+h+kSHLQkYR+
  Kalax.0013s0193.1.p 14 KPRLRWTPQLHSCFVDAVAKLGGPEKATPKAVMRLMGLKGLTLYHLKSHLQKYRI 68
                         79****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.591171IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.2E-311269IPR009057Homeodomain-like
SuperFamilySSF466891.09E-151371IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-231469IPR006447Myb domain, plants
PfamPF002495.6E-91667IPR001005SANT/Myb domain
PfamPF143795.4E-19119156IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MERGYVGGKA AEPKPRLRWT PQLHSCFVDA VAKLGGPEKA TPKAVMRLMG LKGLTLYHLK  60
SHLQKYRIGQ QARKSSSEQS KDSSGDSRKM QASGATATSS GACSGQGDAD AALIYAASSQ  120
TEAQKRLHDQ LEVQRRLQMR IEAQGKYLQS VLEKARTHLT LRTGSSPAAG SDQARAQQLT  180
GFNLALDDDV NGVQKDTDAN FRSKDFFQSF LQNQHREMQE DEKPDVKQLR LF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002264257.22e-63PREDICTED: myb family transcription factor APL
RefseqXP_008800017.12e-63PREDICTED: myb family transcription factor APL
RefseqXP_008800016.12e-63PREDICTED: myb family transcription factor APL
SwissprotQ9SAK53e-49APL_ARATH; Myb family transcription factor APL
TrEMBLD7U3R92e-63D7U3R9_VITVI; Putative uncharacterized protein
STRINGVIT_02s0033g00300.t015e-63(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.11e-48G2-like family protein